For detailed schedule of each talk, please refer to the scientific program (to be posted soon).
| Title of Paper | Authors |
| Analysis of hypoxiamiR-gene co-regulatory network reveals complex regulation of cell cycle control under hypoxic conditions. | Apoorv Gupta, Dr. Ragumani Sugadev, Dr. Yogendra Kumar Sharma and Dr. Pankaj Khurana |
| BioReader: a text mining tool for performing complex queries of biomedical literature | Christian Simon, Kristian Davidsen, Christina Hansen, Emily Seymour Mike Bogetofte Barnkob, Lars Rønn Olsen |
| Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions | Ronesh Sharma |
| Deep Transfer Learning for Biology Cross-domain Image Classification | Angang Du, Chao Wang, Jing Liu, Zhaorui Gu, Zhibin Yu, Nan Wang, Haiyong Zheng and Bing Zheng |
| Exploiting Deep Convolutional Neural Network to Identify Succinylated Sites on Lysine Residues | Hui-Ju Kao, Kai-Yao Huang and Tzong-Yi Lee |
| Latent network-based representations for large-scale gene expression data analysis | Wajdi Dhifli, Julia Puig, Aurélien Dispot, Mohamed Elati |
| Discovery of Large Disjoint Motif in Biological Network using Dynamic Expansion Tree | Sabyasachi Patra and Anjali Mohapatra |
| Prediction of half-maximal inhibitory concentration (IC50) for small chemical modulators targeting protein-protein interaction using support vector machine | Tanmoy Jana , Raja Banerjee , Sudipto Saha |
| Prediction of ATP-binding sites in membrane proteinsusing a two-dimensional convolutional neural network" | Trinh Trung Duong Nguyen, Nguyen Quoc Khanh Le, Rosdyana Mangir Irawan Kusuma and Yu-Yen Ou |
| Drug candidate identification based on gene expression of treated cells using tensor decomposition-based unsupervised feature extraction for large-scale data | Y-h. Taguchi |
| FFANEprot: Predicting Protein Functions using a Weight-sharing Multitask Neural Network Optimized by a Firefly Algorithm with Natural Enemy Strategy | Yi-Fan Liou, Po-Jung Tsai, Zi-Yu Huang, Po-Chin Chiou, Hsiao-Wei Chu, Li-Ping Ciou and Torborn E. M. Nordling |
| Automated Craniofacial Landmarks Detection on 3D Image using Geometry Characteristics Information | Arpah Abu, Ngo Chee Guan, Nur Idayu Adira Abu Hassan , Siti Adibah Othman |
| GCAC : Galaxy Workflow System for Predictive Model Building for Virtual Screening | Deepak R. Bharti , Anmol J. Hemrom, Andrew M. Lynn |
| ENVirT: inference of ecological characteristics of viruses from metagenomic data | Duleepa Jayasundara, Isaam Saeed, Damayanthi Herath, Cheng-Yu Yang, Damith Senanayake, Yuan Sun, Bill C Chang, Sen-Lin Tang and Saman K Halgamuge |
| The potential of computational modeling to predict disease course and treatment response in patients with relapsing multiple sclerosis. | Francesco Pappalardo, Giulia Russo, Marzio Pennisi, Valentina Rapicavoli , Santo Motta, Davide Maimone |
| Structural, functional and molecular dynamics analysis of cathepsin B gene SNPs associated with tropical calcific pancreatitis, a rare disease of tropics. | Garima Singh, Jayadev Msk, Rinku Sharma, Basharat Bhat, Ch Madhusudhan and Ashutosh Singh |
| Inverse Similarity and Reliable Negative Samples for Drug Side-effect Prediction | Yi Zheng, Hui Peng, Shameek Ghosh, Chaowang Lan and Jinyan Li |
| Network-based approach to identify Molecular signatures and therapeutic agents in Alzheimer’s diseases | Md. Rezanur Rahman, Tania Islam, Esra Gov, Beste Turanli, Hossain Md. Faruquee, Md. Mafizur Rahman, Md. Nurul Haque Mollah, Kazım Yalcın Arga and Mohammad Ali Moni |
| Robust identification of significant interactions between toxicogenomic biomarkers and their regulatory chemical compounds using moving range chart | Mohammad Hasan, Anjuman Ara Begum, Moizur Rahman and Md. Nurul Haque Mollah |
| E-Pharmacophore-based screening of mGluR5 Negative Allosteric Modulators for Central Nervous System Disorder | Sanjeev Singh and Sitrarasu Vijaya Prabhu |
| Development of Electronic Medical Records for Clinical and Research Purposes: The Breast Cancer Module Using an Implementation Framework in a Middle Income Country- Malaysia | Nurul Aqilah Mohd Nor, Nur Aishah Taib, Marniza Saad, Hana Salwani Zaini4, Zahir Ahmad, Yamin Ahmad, Sarinder Kaur Dhillon |
| Exploitation of reverse vaccinology and immunoinformatics as promising platform for genome-wide screening of new effective vaccine candidates against Plasmodium falciparum | Manisha Pritam, Garima Singh, Suchit Swaroop, Akhilesh Kumar Singh and Satarudra Prakash Singh |
| Prediction and analysis of skin cancer progression using genomics profiles of patients | Sherry Bhalla, Harpreet Kaur, Anjali Dhall and Gajendra P. S Raghava |
| Computational Discovery and Annotation of Conserved Small Open Reading Frames in Fungal Genomes | Shuhaila Mat Sharani and Mohd Firdaus-Raih |
| Integrating pharmacophore mapping, virtual screening, density functional theory, molecular simulation towards the discovery of novel apolipoprotein (apoE ε4) inhibitors | Surabhi Johari, Ashwani Sharma, Subrata Sinha and Aparoop Das |
| Molecular identification and evolutionary relationships between the subspecies of Musa by DNA barcodes | S. Dhivya, I. Gowtham, A Baala Harini, S. Mukunthakumar and R. Sathishkumar |
| Diverse dynamics features of novel protein kinase C (PKC) isozymes determine the selectivity of a fluorinated balanol analogue for PKCε | Ari Hardianto, Varun Khanna, Fei Liu, Shoba Ranganathan |
| Identifying Condition Specific Key Genes from Basal-Like Breast Cancer Gene Expression Data | Ankush Maind and Shital Raut |
| Phylogenetic implications and secondary structure analyses of Vigna mungo (L.) Hepper genotypes based on nrDNA ITS2 sequences | Bhavisha P. Sheth, Sumer Punia, Meenakshi Dheer, Purvi M. Rakhashiya, Pooja P. Patel and Vrinda S. Thaker |
| Construction of Competing Endogenous RNA Networks from Paired RNA-seq Data Sets by Pointwise Mutual Information Theories | Chaowang Lan, Hui Peng, Gyorgy Hutvagner and Jinyan Li |
| EpiMethEx: a tool for large-scale integrated analysis in methylation hotspots linked to genetic regulation | Saverio Candido, Giuseppe Alessandro Parasiliti Palumbo, Marzio Pennisi, Giulia Russo, Giuseppe Sgroi, Valentina Di Salvatore, Massimo Libraˆ and Francesco Pappalardo |
| HumCFS A database of fragile sites in human chromosomes | Rajesh Kumar , Gandharva Nagpal , Vinod Kumar , Salman, SadullahUsmani, Piyush Agrawal , Gajendra P.S.Raghava, |
| Classification of early and late stage Liver Hepatocellular Carcinoma patients from their genomics and epigenomics profiles. | Harpreet Kaur, Sherry Bhalla and Gajendra P.S. Raghava |
| Functional homogeneity and specificity of topological modules in human proteome | Rama Kaalia and Jagath C. Rajapakse |
| Analyzing the 3D Chromatin Organization Coordinating with Gene Expression Regulation in B-cell Lymphoma | Luis A. E. Nagai, Sung-Joon Park, Kenta Nakai |
| A New Robust Scaling Approach for Metabolomics Data Analysis | Nishith Kumar, Md. Shahjaman, S. M. Shahinul Islam, Md. Nurul Haque Mollah and Md. Aminul Hoque |
| 7bgzf: Replacing samtools bgzip Deflation for Archiving and Real-time Compression | Taiju Yamada |
| Analysis of microRNAs, phased small interfering RNAs and their potential targets in Rosa rugosa Thunb. | Junqiang Guo, Qingyi Wang, Li Liu, Shuchao Ren, Shipeng Li, Peiran Liao, Zhigang Zhao, Chenyu Lu, Bingbing Jiang, Ramanjulu Sunkar and Yun Zheng |
| HseSUMO: Sumoylation site prediction using half-sphere exposures of amino acids residues | Alok Sharma, Artem Lysenko, Yosveny Lopez, Abdollah Dehzangi, Hamendra Reddy, Abdul Sattar, Tatsuhiko Tsunoda |
| The Complete Chloroplast Genome of Dendrobium nobile, an endangered medicinal orchid from Northeast India and its comparison with related chloroplast genomes of Dendrobium species | Ruchishree Konhar, Manish Debnath, Atanu Bhattacharjee, Durai Sundar, Pramod Tandon, Debasis Dash, Devendra Kumar Biswal |
| An Emerging Technique for Reducing the Response Time in Plant miRNA Identification | Somrak Numnark and Worasait Suwannik |
| Structural bioinformatics-based identification of putative plant based lead compounds for Alzheimer Disease Therapy | Kasmika Borah, Sanchita Sharma and Yumnam Silla |
| Comparative analysis of thermal, chemical and thermochemical unfolding of proteins from different classes | Sapna Mayuri Borah and Anupam Nath Jha |
| EvolStruct-Phogly: incorporating structural properties and evolutionary information from profile bigrams for the phosphoglycerylation prediction | Alok Sharma |
| Physicochemical property based computational scheme for classifying DNA sequence elements of Saccharomyces cerevisiae. | Atul Kumar Jaiswal and Annangarachari Krishnamachari |
| Benchmarking of different molecular docking methods for protein-peptide docking | Piyush Agrawal, Harinder Singh,, Hemant Kumar Srivastava, Sandeep Singh, Gaurav Kishore, Gajendra P. S. Raghava |
| GlyStruct: Glycation prediction using structural properties of amino acid residues | Hamendra Manhar Reddy, Alok Sharma, Abdollah Dehzangi , Daiichi Shigemizu,Abel Avitesh Chandra, Tatushiko Tsunoda |
| Tree-Based Proximity Search Protein Domain Identification | Maad Shatnawi |
| Discovery of a Robust Gene Regulatory Network with Complex Transcription Factor Network Analysis and the Tensor decomposition-based Feature Extraction on Organ Cancer Cell-line RNA Sequence Data |
Bharata Kalbuaji, Y.-H. Taguchi and Akihiko Konagaya* |
| Characterization and identification of lysine glutarylation based on intrinsic interdependence between positions in the substrate sites | Kai-Yao Huang, Hui-Ju Kao, Justin Bo-Kai Hsu, Sung-Lung Weng and Tzong-Yi Lee |
| Identification of potential biomarkers related to glioma survival by gene expression profile analysis |
Justin Bo-Kai Hsu1,*, Tzu-Hao Chang, Gilbert Aaron Lee, Tzong-Yi Lee |
| RepEx: A web server to extract sequence repeats from Protein and DNA sequences | Gurusaran Manickam, Daliah Michael, Md. Khaja Hussain, Satheesh S.N., Suhan S, Sivaranjan P, Akanksha Jaiswal and Kanagaraj Sekar |
| Implementation of Homology Based and Non Homology Based Computational Methods for the Identification and Annotation of Orphan Enzymes: Using Mycobacterium tuberculosis H37Rv as a Case Study | Swati Sinha, Andrew M. Lynn, Dhwani K Desai |